PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G190100.1.p
Common NamePRUPE_ppa010295mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 256aa    MW: 28100.5 Da    PI: 5.2168
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G190100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH171.1e-053584154
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        +r  + erE++ R++ N+ f eL + l  +    ++ + Ka+iL +A++ +k+L
  Prupe.5G190100.1.p 35 KRIHKAEREKQKREHFNELFLELADALELN----QQNNGKASILCEATRLLKDL 84
                        688899*********************998....68899999******999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.40E-53284No hitNo description
Gene3DG3DSA:4.10.280.109.3E-733103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-113499IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.6363484IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MGSQDPVPAA DKANVTEASV RGACSGKKIQ GKIPKRIHKA EREKQKREHF NELFLELADA  60
LELNQQNNGK ASILCEATRL LKDLIGQIEY LQKENASLLS ESNYMTIEKN ELREDNSALE  120
TQNEKLHSEI EDKVVQSKPD LNAALPCAEL RPEVASHFTG TSVSLPTQDP SLQQAPAVFV  180
MPLCPDLQSY PLPDAAQLTS NTTSHVSKPH ARYPTSVDSW PSQLLGEKPT AGKESRQLGD  240
SSNICRSRET DPDNM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209498.10.0hypothetical protein PRUPE_ppa010295mg
SwissprotQ9SN745e-66BH047_ARATH; Transcription factor bHLH47
TrEMBLM5WAB80.0M5WAB8_PRUPE; Uncharacterized protein
STRINGGLYMA05G01150.12e-80(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF82232531
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.38e-55bHLH family protein